Worm Breeder's Gazette 5(2): 26

These abstracts should not be cited in bibliographies. Material contained herein should be treated as personal communication and should be cited as such only with the consent of the author.

Deletions Affecting the unc-54 Gene

P. Anderson

Figure 1

Using a combination of genetic and physical techniques, twenty 
independent deletions that affect the unc-54 myosin heavy chain gene 
have been identified.  Eighteen of these deletions were isolated using 
a selective technique previously described (1979 C.  elegans meeting 
abstracts).  Briefly, this selection is based upon relief from the 
dominant effects of the unc-54 mutation e1152.  New recessive 
mutations are selected because they eliminate the dominance of e1152 
and yield phenotypically wild-type heterozygotes.  A large collection 
of EMS and DE0 (1,2,7,8-diepoxyoctane) induced unc-54 mutations has 
been analyzed for the presence of deletions.
Thirteen deletions have been identified by genetic criteria.  Each 
is lethal when homozygous.  Each maps as a deletion of chromosome 1 
material that includes unc-54.  In order to demonstrate this, a number 
of essential genes near unc-54 has been defined by the isolation of 
point mutations that are recessive to wild-type and lethal when 
homozygous.  Complementation tests between unc-54 deletion mutations, 
the nearby recessive lethal point mutations, and other mutations 
previously shown to be near unc-54 allow a detailed fine structure map 
of the chromosomal region surrounding unc-54 to be constructed.  This 
map is shown below.
An additional seven deletion mutations have been identified by 
physical criteria.  Each is viable when homozygous but exhibits an 
altered pattern of DNA restriction fragments from the unc-54 region.  
In each case, the altered pattern indicates that the mutation results 
from simple deletion of DNA sequences.  Six of these deletions are 
small (~100-600 base pairs) and one is greater than 15 kilobase pairs 
in length.  Each affects unc-54 mRNA coding sequences.  The precise 
location of all deletion alleles upon the physical map of this 
chromosomal region is currently being determined.
The number and sizes of deletions among total alleles are strikingly 
different for EMS and DE0 induced mutations.  For DE0, approximately 
17% (13/77) of total alleles are deletions by genetic criteria, and 
therefore very large.  Another 6% (3/50) are deletions by only 
physical criteria, and are quite small.  Thus, approximately 23% of 
DE0 induced mutations are deletions.  For EMS, less than 3% (0/36) of 
total alleles are deletions by genetic analysis.  However, 16% (4/25) 
are deletions of small regions of the gene (200-600 base pairs).  
Clearly, these sample sizes are not large enough to make strong 
statements, but something looks odd.
[See Figure 1]

Figure 1